Fitbit

Integrating Fitbit's health metrics with Avicenna's research tools can provide a comprehensive view of individual well-being, allowing for more accurate health analyses and personalized care plans. This section explains how Fitbit integrates with Avicenna, making it easier for researchers to understand and use the health-related data of their participants.

Supported Fitbit Metrics in Avicenna

In this section, we list the comprehensive range of Fitbit metrics that Avicenna supports.

Fitbit Activity Summary

Provides a summary of a user's daily activities. It is stored internally as fitbit_daily_activity, and includes the following fields:

• Record Time: Start time of the day the summary pertains to. Internally recorded as record_time.
• Activity Calories: Calories burned during active periods throughout the day. Internally recorded as activity_calories.
• Calories: Total calories burned, including BMR, tracked activity, and manual logs. Internally recorded as calories.
• BMR Calories: Number of BMR calories. Internally recorded as calories_bmr.
• Distance: Estimated daily distance traveled, measured in meters. Internally recorded as distance.
• Elevation: Change in altitude throughout the day, measured in meters. Internally recorded as elevation.
• Floors: Approximate number of floors climbed. Internally recorded as floors.
• Sedentary Duration: The cumulative duration of the participant being sedentary over the day, measured in minutes. Internally stored as minutes_sedentary.
• Lightly Active Duration: The cumulative duration of the participant being lightly active over the day, measured in minutes. Internally stored as minutes_lightly_active.
• Fairly Active Duration: The cumulative duration of the participant being fairly active over the day, measured in minutes. Internally stored as minutes_fairly_active.
• Very Active Duration: The cumulative duration of the participant being very active over the day, measured in minutes. Internally stored as minutes_very_active.
• Steps: Number of steps taken. Internally recorded as steps.

Fitbit Activity Intraday

Download Sample Datacsv

Offers a snapshot of the user’s activity in 1-minute intervals. This is internally stored in the fitbit_activity table. The available fields for this metric are:

• Record Time: Starting time of the interval for which the data is recorded. Internally stored as record_time.
• Calories: Total calories burned, including BMR, tracked activities, and manually logged exercises during the time interval. Internally stored as calories.
• Distance: Estimated distance in meters traversed by the participant within the time interval. Internally stored as distance.
• Elevation: Estimated change in vertical height in meters during the time interval. Internally stored as elevation.
• Floors: Approximate number of floors ascended by the participant throughout the time interval. Internally stored as floors.
• Sedentary Duration: Total time in minutes the participant was sedentary during the time interval. Internally stored as minutes_sedentary.
• Lightly Active Duration: Cumulative time in minutes the participant was lightly active throughout the time interval. Internally stored as minutes_lightly_active.
• Fairly Active Duration: Cumulative time in minutes the participant was moderately active throughout the time interval. Internally stored as minutes_fairly_active.
• Very Active Duration: Cumulative time in minutes that the participant was intensely active throughout the time interval. Internally stored as minutes_very_active.
• Steps: Total number of steps taken by the participant during the time interval. Internally stored as steps.

Fitbit Sleep

Download Sample Datacsv

It contains details about the user's sleep patterns. It is internally recorded in the fitbit_sleep database table, and includes these fields:

• Start Time: Start time of the sleep log. Internally recorded as start_time.
• End Time: End time of the sleep log. Internally recorded as end_time.
• Log Type: Type of sleep log based on the detection method, either auto-detected or manually logged. Internally recorded as log_type. The following values are included:
  • auto_detected: Automatically detected by the sleep detection service.
  • manual: Logged or edited manually by the user.
• Duration: Total length of the sleep log, measured in seconds. Internally recorded as duration_sec.
• Efficiency: The sleep efficiency score, is calculated out of 100. Internally recorded as sleep_efficiency.
• Main Sleep: A boolean value indicating if the log pertains to the main sleep session of the day. Internally recorded as is_main_sleep.
• After Wake Duration: Total number of minutes the user remained awake after initially waking up. Internally recorded as minutes_after_wakeup.
• Asleep Duration: Total number of minutes the user was asleep. Internally recorded as minutes_asleep.
• Awake Duration: Total number of minutes the user was awake during the sleep session. Internally recorded as minutes_awake.
• To Fall Sleep Duration: Time in minutes it took for the user to fall asleep. This is generally 0 for auto-detected sleep logs. Internally recorded as minutes_to_fall_sleep.
• In-Bed Duration: Total time in minutes the user spent in bed. Internally recorded as minutes_in_bed.

Fitbit Heart Rate

Download Sample Datacsv

This metric includes the heart-rate-related data. It is recorded internally as fitbit_heart_rate, and includes these fields:

• Record Time: When the heart rate value was recorded. Internally recorded as record_time.
• Heart Rate: Heart rate value during the day in BPM. Internally recorded as heart_rate.

Fitbit Weight Log

This metric contains the user's weight logs. It is stored internally as fitbit_weight_log, and includes these fields:

• Weight: The weight value in kilograms. Internally recorded as weight.
• BMI: The Body Mass Index value. Internally recorded as bmi.
• Fat: The fat percentage. Internally recorded as fat. If it is not available, this field will not be present.
• Source: The source of the weight data. API means data originated from a 3rd party integration using the Web API, the data was manually entered into the Fitbit mobile or web application, or the data recorded by a predefined scale was manually edited. Aria means the data originated from an Aria or Aria 2 scale. AriaAir means the data originated from an Aria Air scale. Withings means the data originated from a Withings scale. Internally recorded as source.

Data Collection Behavior

Whenever there is new Fitbit data, the Fitbit's server will send the new data to Avicenna.

Adding Fitbit As a Data Source

See Accessing Data Sources.

Monitoring Fitbit Data

There are two ways to monitor and export Fitbit data: using the Data Export page and using Kibana.

Fitbit Data Source in Participant App

After a participant joins a study, they need to grant access to Avicenna to collect data. To do that, the participant needs to go to Settings on the Avicenna app and click on My Studies. Then they should choose the study that is collecting Fitbit data. On the study's page, clicking on the Data Sources will take them to the data sources page:

On this page, the participant will see all of the data sources that the study uses to collect data. Among these data sources, on the corner of the Fitbit data source(s), there is a Grant Access button:

By clicking on the Grant Access button, the participant will be directed to the sign-in page of the Fitbit official website. Then, they can decide what information is going to be shared with Avicenna:

note

Checking the Allow All check box and then pressing the Allow button, will allow Avicenna to collect all kinds of data from Fitbit, in case the researcher added another metric to the study.

After clicking on Allow, the participant will be redirected to the Data Sources page of the study in the Avicenna app, and they have successfully granted access to Avicenna to gather Fitbit data.

The participants can stop sharing the data anytime by clicking on Revoke Access on the Data Sources page.